I think one issue here is that "manual transfer switch" is too vague a term. It can mean a Double Throw Safety Switch, or, as mentioned above, can mean an electrically operated transfer switch system with manual control operation and without the automatic line sensing feature. Manufactuers such as Zenith and Asco who also make ATS systems tend to refer to the non-automatic electrically operated systems as MTS, whereas people like Sq. D, Siemens and Cutler Hammer, who make Safety Switch disconnects, tend to refer to DT Safety Switches as MTS. Both are right, but the difference can be important when discussing this specific issue.
I think that one issue that can differentiate is the UL listing. The one's refered to by the ATS makers will have a UL1008 rating as a "non-automatic transfer switch", the ones that are DT Safety Switches will have a UL98 rating as a Disconnect Device.