Is it a new, or older unit? If older, worn shoes, correct roller shoes for emt or rigid? Rollers binding? Alignment of shoe to rollers?
You may need to set the degrees for a test bend, and adjust setting on next, so that the bend is done in “one shot” without bumping the controller.
I think I have had this problem before, maybe on an older unit. IIRC, it may have been missing a small roller , or was bent, allowing the pipe to flex a little between the rollers and main shoe.