Unless you are using threaded conduit and can get a little extra thread into your enclosure, it isn't all that often there is enough thread for a second locknut. Cinching it tight shouldn't be all that important - bonding is being achieved by tightening the set screw on the bushing more so than by tightening of "the locknut". Remember you were using a bonding bushing because improved bonding was necessary in the first place.
I have used bonding bushings when entering a non metallic enclosure at times - those often have thicker walls and no way you are getting a second locknut on a fitting with fixed amount of threads. Same applies, the set screw and a bonding wire is the reason you used the bonding bushing in the first place.