I think there are too many variables for someone to answer a general question like this. I've been doing this over a year, and I haven't really gotten it figured out yet. If I really wanted to focus on residential new builds, I think what I would do is create a spreadsheet to add up all my costs for a house, copy it several times for houses of different sizes, go to the library and photocopy some typical house plans, mark them up with all electrical items, probably add the low-voltage stuff separately as an add-on cost, and plug in all the numbers. The most difficult being, how much time does it take your employees to run a length of wire? One of the major estimating programs that I tried out seemed to have a per-foot cost as well as a fixed cost per piece of wire, to calculate the labor.
You really have to do a few jobs before you know for sure what your costs are.