Exactly. We have an isolated phase installation with ferrous conduits. We already have the (parasitic) magnetic core. We also have a neutral conductor in each conduit, presumably 3 'parallel' conductors. So we already have at least 1 shorted turn in the parasitic transformer.
The metal bottom adds yet another problem: it shorts the conduit together so that you can have induced current in the conduit itself.
IMHO if @tedmutt were to open 3 holes for the 3 conduit so that there was no electrical connectivity between them, then the tiny amount of sheet metal forming a magnetic path would be a drop in the bucket compared to the conduit themselves. However opening 1 large hole would make the installation far more like the original 'open bottom' installation.
Given that the original installation had a known problem but worked fine for 30 years, my _preference_ would be to fix the issue completely, with my second choice trying to match the original installation, with full open bottom or large hole for all the conduit or a plastic panel supporting the conduit through the wall into the equipment. Also: nothing metallic shorting the conduit together.