I'm not 100% clear here where your function lies in this installation. Are you just the Smoke Detector installer? If so, did you accept a contract that included investigation time of the entire system operating scheme? Without that I would not do any termination into the VFD or control system due to liability issues, unless specifically stated as a requirement in your contract (so your insurance will cover you). If something you do might have unforeseen consequences, how are you going to know if you never had anything to do with the BAS (Building Automation System) in the first place? I would insist that you will provide the circuit from your detector, someone else will need to take responsibility for interfacing it to the BAS. You could offer to do it under a separate contract if you feel qualified, but I wouldn't take it on under a simple "supply and install this detector" contract. Besides, do you really know the function of those contactors? Sometimes they are for maintenance bypass, but sometimes they are for automated emergency bypass and if you drop out the wrong one, the PLC may automatically switch to the other one. Again, without direct knowledge of the entire system, I would not volunteer for it. Attaining that knowledge may involve more billable hours than you contracted for. If you took it on as a T&M job, then I would make sure the owner understands what he is looking at.
By the way, being that this is strictly an "Emergency" shutdown situation, there is no real difference between line or load side contactors; either one will do the job. But if there is a "glitch" in the relay / control circuit and it causes the contactors cycle on-off rapidly, the VFD could be damaged regardless of which side it is on. If it is on the load side, you could also include a drop-out of the Run command so that the VFD is always "off" by the time the contactor opens. That won't help if the contactor is on the Line side though; the rapid charging / discharging of the caps will likely lead to premature failure.