There are different TYPES of 2 speed motors, so it will depend on what you have and how the CTs are connected. It's easy to get it wrong, but it might be right.
If it is a 2S2W motor and you only put the CTs on the low speed set of windings, it would not read current at all, so it must be a 2S1W motor. There are 3 different types of those, Costant HP, Constant Torque, and Variable Torque configurations. In the last two types, the higher speed should still read higher amps than the lower speed, but if the CTs are in the wrong place, you might only be reading a portion of the current. In the Constant HP configuration, the higher speed means less torque for the HP to remain the same, so less torque means less current. But without knowing what you have, it's impossible to tell.
Look at the starter. If there are only two contactors, it's 2S2W, so something it wrong if it is reading that way. If there are 3 contactors, it's 2S1W. So then look at the motor nameplate. If it shows two HP ratings, it's CT or VT, so something is wrong with the CT setup. If the nameplate shows one HP rating, it's CHP and it likely will read less amps at the higher speed.