Putting aside the bonding on the primary (480V) side and answering the question you CAME HERE to ask; there is no requirement for Medium Voltage (1kV and up) to have a Delta system grounded or to have GF monitoring. That NEC requirement (250.21.B) ONLY pertains to systems below 1000V. That's not to say it isn't a good idea, that's just answering your question as to satisfying NEC requirements.
Most of the Delta MV systems I have worked on are not corner grounded but do have protective relaying that would detect a GF and therefore would meet the same intent as 250.21.B. However in your specific application, i.e. stepping up and back down just for long distances, it is in fact quite common to not have that.